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AT4G01410


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01410

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00244400 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00212910 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G61760 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT4G05220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT5G06320 NHL3 NDR1/HIN1-like 3 0.03 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT5G53730 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08421 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05266.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05268.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05269.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55074.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G002200.1 Ceric.29G002200 not classified & original description: pacid=50624873... 0.04 OrthoFinder output from all 47 species
Ceric.30G026900.1 NHL25, Ceric.30G026900 not classified & original description: pacid=50608145... 0.03 OrthoFinder output from all 47 species
Ceric.39G045900.1 Ceric.39G045900 not classified & original description: pacid=50583407... 0.03 OrthoFinder output from all 47 species
Dac_g12219 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012622001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01016858001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031450001 No alias Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00667 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_14222 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26589 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_27157 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g39290.1 LOC_Os01g39290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g01060.1 LOC_Os02g01060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g58850.1 NHL10, YLS9,... NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os05g11010.1 LOC_Os05g11010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01220.1 LOC_Os08g01220 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g16671 NHL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10155182g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_112233g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_47856g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_606673g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g44893 NHL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33043 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42089 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002121 NHL25 not classified & original description: CDS=1-789 0.03 OrthoFinder output from all 47 species
Solyc02g080100.1.1 Solyc02g080100 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g121620.1.1 Solyc03g121620 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g22420 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56346 NHL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12739 NHL3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e002284_P001 Zm00001e002284 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e004504_P001 Zm00001e004504 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e006462_P001 Zm00001e006462 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010501_P001 Zm00001e010501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012610_P001 Zm00001e012610 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e019181_P001 NHL3, Zm00001e019181 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019498_P001 Zm00001e019498 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020501_P001 Zm00001e020501 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e041974_P001 Zm00001e041974 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1902446 regulation of shade avoidance IEP HCCA
BP GO:1902448 positive regulation of shade avoidance IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 99 195
No external refs found!