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  5. AT4G01240

AT4G01240


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG0001244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01240
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00160150 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00146p00079960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g33722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16468.t1 Aspi01Gene16468 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33959.t1 Aspi01Gene33959 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57852.t1 Aspi01Gene57852 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57880.t1 Aspi01Gene57880 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014720 No alias not classified & original description: CDS=1-1314 0.06 OrthoFinder output from all 47 species
Ceric.22G059000.1 Ceric.22G059000 not classified & original description: pacid=50614041... 0.05 OrthoFinder output from all 47 species
Dcu_g25472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009864001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g36710.1 LOC_Os04g36710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g04680.1 LOC_Os06g04680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g13955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10105408g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_604167g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6067g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g41861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g095190.2.1 Solyc01g095190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g071160.4.1 Solyc02g071160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002493_P001 Zm00001e002493 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029139_P001 Zm00001e029139 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010623 programmed cell death involved in cell development IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 500 620
No external refs found!