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  5. AT4G01000

AT4G01000


Description : Ubiquitin-like superfamily protein


Gene families : OG0004209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01000
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g48930.1 LOC_Os01g48930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g30186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000785 chromatin IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008824 cyanate hydratase activity IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0009440 cyanate catabolic process IEP HCCA
BP GO:0010071 root meristem specification IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
MF GO:0035671 enone reductase activity IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044001 migration in host IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045836 positive regulation of meiotic nuclear division IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046740 transport of virus in host, cell to cell IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051446 positive regulation of meiotic cell cycle IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051785 positive regulation of nuclear division IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080022 primary root development IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR024974 Sde2_N 68 153
No external refs found!