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  5. AT4G00320

AT4G00320


Description : F-box/RNI-like superfamily protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00320
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G52650 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G29930 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.04 OrthoFinder output from all 47 species
AT3G54160 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G58920 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G58950 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G59160 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59230 No alias RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G59240 No alias RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G62440 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G15620 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G25860 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.07 OrthoFinder output from all 47 species
AT5G38396 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0016020 membrane IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 179 203
No external refs found!