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  5. AT3G63070

AT3G63070


Description : Tudor/PWWP/MBT domain-containing protein


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G63070

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 HUA2,... RNA biosynthesis.transcriptional activation.HUA2... 0.17 OrthoFinder output from all 47 species
Adi_g019417 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g055828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077952 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g086267 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113316 HUA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11061 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12546 HUA2 HUA2-type transcription factor & original description: none 0.14 OrthoFinder output from all 47 species
Ala_g15874 HUA2 HUA2-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g22454 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42142 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17265 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20186 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene06214.t1 HUA2, Aspi01Gene06214 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42433.t1 Aspi01Gene42433 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0006.g009802 HUA2 HUA2-type transcription factor & original description:... 0.12 OrthoFinder output from all 47 species
Azfi_s0032.g024616 HUA2 HUA2-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Azfi_s0119.g046734 HUA2 HUA2-type transcription factor & original description: CDS=1-4872 0.06 OrthoFinder output from all 47 species
Cba_g72521 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G048700.1 HUA2, Ceric.33G048700 HUA2-type transcription factor & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.36G034600.1 HUA2, Ceric.36G034600 HUA2-type transcription factor & original description:... 0.1 OrthoFinder output from all 47 species
Dac_g09393 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14860 HUA2 HUA2-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g05965 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10037 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21799 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25712 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011100001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.13 OrthoFinder output from all 47 species
GSVIVT01012049001 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.14 OrthoFinder output from all 47 species
Gb_39860 HUA2 transcription factor (HUA2) 0.1 OrthoFinder output from all 47 species
LOC_Os03g24339.1 LOC_Os03g24339 transcription factor (HUA2) 0.1 OrthoFinder output from all 47 species
LOC_Os07g46180.1 LOC_Os07g46180 transcription factor (HUA2) 0.12 OrthoFinder output from all 47 species
LOC_Os08g01054.2 HUA2, LOC_Os08g01054 transcription factor (HUA2) 0.13 OrthoFinder output from all 47 species
Len_g21971 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g53945 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54062 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04290 HUA2 HUA2-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
MA_3338g0010 No alias transcription factor (HUA2) 0.14 OrthoFinder output from all 47 species
MA_9328225g0010 HUA2 Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_9359526g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp8g15320.1 HUA2 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Msp_g27240 HUA2 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g08516 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12711 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36625 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g13849 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13358 HUA2 HUA2-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g30186 No alias HUA2-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g51385 No alias HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Smo404055 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.07 OrthoFinder output from all 47 species
Smo414202 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.04 OrthoFinder output from all 47 species
Solyc02g014130.3.1 HUA2, Solyc02g014130 ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Solyc09g064840.4.1 Solyc09g064840 transcription factor (HUA2) 0.14 OrthoFinder output from all 47 species
Spa_g08440 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10511 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11569 HUA2 HUA2-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e001720_P002 Zm00001e001720 transcription factor (HUA2) 0.07 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Zm00001e029104_P001 HUA2, Zm00001e029104 transcription factor (HUA2) 0.12 OrthoFinder output from all 47 species
Zm00001e038169_P004 Zm00001e038169 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016035 zeta DNA polymerase complex IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019985 translesion synthesis IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0048867 stem cell fate determination IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 23 108
No external refs found!