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  5. AT3G62730

AT3G62730


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62730
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G47980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g015813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008071 No alias not classified & original description: CDS=1-903 0.03 OrthoFinder output from all 47 species
Ceric.19G026500.1 Ceric.19G026500 not classified & original description: pacid=50575626... 0.03 OrthoFinder output from all 47 species
Ceric.19G027300.1 Ceric.19G027300 not classified & original description: pacid=50576564... 0.03 OrthoFinder output from all 47 species
Dde_g46974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027969001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Len_g46479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_18461g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Msp_g28978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo143620 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Spa_g46655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001638_P001 Zm00001e001638 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 OrthoFinder output from all 47 species
Zm00001e040816_P001 Zm00001e040816 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042214 terpene metabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
MF GO:0080072 spermidine:sinapoyl CoA N-acyltransferase activity IEP HCCA
MF GO:0080089 sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!