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AT3G61180


Description : RING/U-box superfamily protein


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G61180

Target Alias Description ECC score Gene Family Method Actions
Aev_g07126 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g15765 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31213 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61419 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18805 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 322 364
No external refs found!