AT3G60630 (HAM2, LOM2, ATHAM2)


Aliases : HAM2, LOM2, ATHAM2

Description : GRAS family transcription factor


Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G60630

Target Alias Description ECC score Gene Family Method Actions
AT4G00150 ATHAM3, HAM3, LOM3 GRAS family transcription factor 0.04 OrthoFinder output from all 47 species
Adi_g110644 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21901 HAM2, LOM2, ATHAM2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G011800.1 HAM2, LOM2,... GRAS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12093 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01644 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03844 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08846 SCR, SGR1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16153 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g090950.4.1 ATHAM3, HAM3,... transcription factor (GRAS) 0.08 OrthoFinder output from all 47 species
Zm00001e007302_P001 ATHAM3, HAM3,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Zm00001e015355_P002 ATHAM3, HAM3,... transcription factor (GRAS) 0.08 OrthoFinder output from all 47 species
Zm00001e023181_P003 ATHAM3, HAM3,... transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species
Zm00001e041505_P001 ATHAM3, HAM3,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
BP GO:0007020 microtubule nucleation RCA Interproscan
BP GO:0010492 maintenance of shoot apical meristem identity IGI Interproscan
BP GO:0030154 cell differentiation IMP Interproscan
BP GO:0048768 root hair cell tip growth IMP Interproscan
BP GO:0051301 cell division IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
MF GO:0015929 hexosaminidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 244 622
No external refs found!