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  5. AT3G60400

AT3G60400


Description : Mitochondrial transcription termination factor family protein


Gene families : OG0009777 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G60400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00163040 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
LOC_Os07g22670.1 LOC_Os07g22670 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
LOC_Os08g40630.1 LOC_Os08g40630 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_10432890g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_8470g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc01g090490.1.1 Solyc01g090490 transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Solyc03g063390.1.1 Solyc03g063390 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006513 protein monoubiquitination IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010390 histone monoubiquitination IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016574 histone ubiquitination IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
CC GO:0030870 Mre11 complex IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033523 histone H2B ubiquitination IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 393 529
IPR003690 MTERF 232 334
No external refs found!