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  5. AT3G59270

AT3G59270


Description : FBD-like domain family protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G59270
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT1G21990 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G29910 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42730 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.03 OrthoFinder output from all 47 species
AT3G44810 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G59250 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62430 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT5G38386 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0031540 regulation of anthocyanin biosynthetic process RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0040009 regulation of growth rate IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046622 positive regulation of organ growth IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048639 positive regulation of developmental growth IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!