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AT3G58980


Description : F-box family protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58980

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT1G47920 No alias RNI-like superfamily protein 0.1 OrthoFinder output from all 47 species
AT1G52650 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58820 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58860 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G59230 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59240 No alias RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G15620 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G25860 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0009888 tissue development IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 452 480
IPR013101 Leu-rich_rpt_2 153 179
IPR001810 F-box_dom 3 38
No external refs found!