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AT3G58960


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58960

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.14 OrthoFinder output from all 47 species
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G56610 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.05 OrthoFinder output from all 47 species
AT3G44060 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.06 OrthoFinder output from all 47 species
AT3G49150 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59160 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G59240 No alias RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G00320 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G13960 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.06 OrthoFinder output from all 47 species
AT5G38392 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G41830 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 37
IPR013101 Leu-rich_rpt_2 152 179
No external refs found!