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Description : F-box/RNI-like superfamily protein
Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G58950 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G47915 | No alias | F-box family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G29910 | No alias | F-box/RNI-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT2G29930 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G44180 | No alias | syntaxin-related family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G49150 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G58900 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G59000 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G59160 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00320 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G38392 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003720 | telomerase activity | IEP | HCCA |
| MF | GO:0003721 | telomerase RNA reverse transcriptase activity | IEP | HCCA |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006278 | RNA-templated DNA biosynthetic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007000 | nucleolus organization | IEP | HCCA |
| BP | GO:0007004 | telomere maintenance via telomerase | IEP | HCCA |
| BP | GO:0010833 | telomere maintenance via telomere lengthening | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0048449 | floral organ formation | IEP | HCCA |
| BP | GO:0048451 | petal formation | IEP | HCCA |
| BP | GO:0048453 | sepal formation | IEP | HCCA |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
| BP | GO:0050000 | chromosome localization | IEP | HCCA |
| BP | GO:0051026 | chiasma assembly | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071897 | DNA biosynthetic process | IEP | HCCA |
| BP | GO:1905393 | plant organ formation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 3 | 36 |
| No external refs found! |