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  5. AT3G58880

AT3G58880


Description : F-box/RNI-like superfamily protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58880

Target Alias Description ECC score Gene Family Method Actions
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G56610 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT1G64540 No alias F-box/FBD-like domains containing protein 0.05 OrthoFinder output from all 47 species
AT2G29930 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.07 OrthoFinder output from all 47 species
AT3G44060 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.05 OrthoFinder output from all 47 species
AT3G54160 No alias RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G58920 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G59160 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G13960 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species
AT5G38392 No alias No description available 0.05 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G41830 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 160 185
IPR001810 F-box_dom 6 40
No external refs found!