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  5. AT3G58860

AT3G58860


Description : F-box/RNI-like superfamily protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58860

Target Alias Description ECC score Gene Family Method Actions
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G52650 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G64540 No alias F-box/FBD-like domains containing protein 0.09 OrthoFinder output from all 47 species
AT2G29930 No alias F-box/RNI-like superfamily protein 0.1 OrthoFinder output from all 47 species
AT3G44060 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.04 OrthoFinder output from all 47 species
AT3G49150 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G54160 No alias RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G58920 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58980 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT3G59160 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G59180 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species
AT4G13960 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G22280 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.09 OrthoFinder output from all 47 species
AT5G38392 No alias No description available 0.06 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G41830 No alias RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 8 42
IPR013101 Leu-rich_rpt_2 164 188
No external refs found!