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Description : TRAF-like superfamily protein
Gene families : OG0007645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007645_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G58290 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G31370 | No alias | Ubiquitin-specific protease family C19-related protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G31380 | No alias | TRAF-like family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT1G31390 | No alias | TRAF-like family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G31400 | No alias | TRAF-like family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G01790 | No alias | TRAF-like family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G05420 | No alias | TRAF-like family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G42455 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
| AT2G42460 | No alias | TRAF-like family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT2G42465 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| AT3G27040 | No alias | Meprin and TRAF (MATH) homology domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G29580 | No alias | Arabidopsis phospholipase-like protein (PEARLI 4) with... | 0.1 | OrthoFinder output from all 47 species | |
| AT3G44790 | No alias | TRAF-like family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G44805 | No alias | TRAF-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G58210 | No alias | TRAF-like family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G58280 | No alias | Arabidopsis phospholipase-like protein (PEARLI 4) with... | 0.05 | OrthoFinder output from all 47 species | |
| AT3G58300 | No alias | Arabidopsis phospholipase-like protein (PEARLI 4) family | 0.05 | OrthoFinder output from all 47 species | |
| AT3G58320 | No alias | Ubiquitin-specific protease family C19-related protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G58370 | No alias | TRAF-like family protein | 0.12 | OrthoFinder output from all 47 species | |
| AT3G58400 | No alias | TRAF-like family protein | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006825 | copper ion transport | IEP | HCCA |
| BP | GO:0009900 | dehiscence | IEP | HCCA |
| BP | GO:0009901 | anther dehiscence | IEP | HCCA |
| MF | GO:0015089 | high-affinity copper ion transmembrane transporter activity | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002083 | MATH/TRAF_dom | 16 | 145 |
| No external refs found! |