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AT3G58240


Description : TRAF-like superfamily protein


Gene families : OG0007645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007645_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58240

Target Alias Description ECC score Gene Family Method Actions
AT1G31380 No alias TRAF-like family protein 0.1 OrthoFinder output from all 47 species
AT2G42460 No alias TRAF-like family protein 0.07 OrthoFinder output from all 47 species
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.08 OrthoFinder output from all 47 species
AT3G44790 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT3G44805 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58210 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT3G58320 No alias Ubiquitin-specific protease family C19-related protein 0.03 OrthoFinder output from all 47 species
AT3G58340 No alias TRAF-like family protein 0.18 OrthoFinder output from all 47 species
AT3G58370 No alias TRAF-like family protein 0.14 OrthoFinder output from all 47 species
AT3G58400 No alias TRAF-like family protein 0.02 OrthoFinder output from all 47 species
AT3G58420 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 13 132
No external refs found!