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  5. AT3G56260

AT3G56260


Description : unknown protein; Has 20 Blast hits to 19 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG0008162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56260
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G06930 No alias unknown protein; Has 4478 Blast hits to 355 proteins in... 0.04 OrthoFinder output from all 47 species
AT2G40475 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Gb_08061 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g60940.1 LOC_Os01g60940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g39830.1 LOC_Os05g39830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436665g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_84050g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g007420.1.1 Solyc06g007420 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e019427_P001 Zm00001e019427 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031911_P001 Zm00001e031911 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015175 neutral L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015193 L-proline transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
CC GO:0033106 cis-Golgi network membrane IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0061687 detoxification of inorganic compound IEP HCCA
BP GO:0071585 detoxification of cadmium ion IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA

No InterPro domains available for this sequence

No external refs found!