AT3G55900

Description : F-box family protein

Gene families : OG0004270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004270_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G55900
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AT1G05080	No alias	F-box/RNI-like/FBD-like domains-containing protein	0.04	OrthoFinder output from all 47 species
AT5G56570	No alias	Leucine-rich repeat (LRR) family protein	0.04	OrthoFinder output from all 47 species
AT5G56700	No alias	FBD / Leucine Rich Repeat domains containing protein	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!