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  5. AT3G55090

AT3G55090


Description : ABC-2 type transporter family protein


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55090
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT3G53510 No alias ABC-2 type transporter family protein 0.07 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.08 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32906 WBC19, ATWBC19 ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36964 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01025582001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_24085 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10432886g0010 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp5g04860.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35579 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110 No alias subfamily ABCG transporter & original description: CDS=1-2232 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718 No alias not classified & original description: CDS=1-2514 0.04 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc05g056470.1.1 Solyc05g056470 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g37465 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 108 260
IPR013525 ABC_2_trans 432 640
No external refs found!