AT3G54850 (PUB14, ATPUB14)

Aliases : PUB14, ATPUB14

Description : plant U-box 14

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54850

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00200790	evm_27.TU.AmTr_v1...	U-box domain-containing protein 11 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007619	PUB13, ATPUB13	not classified & original description: CDS=1-951	0.03	OrthoFinder output from all 47 species
LOC_Os12g38210.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Ore_g39748	PUB13, ATPUB13	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017664	PUB13, ATPUB13	E3 ubiquitin ligase & original description: CDS=217-2226	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0016567	protein ubiquitination	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
MF	GO:0033612	receptor serine/threonine kinase binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IPI	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	376	415
IPR000225	Armadillo	459	497
IPR000225	Armadillo	540	579
IPR003613	Ubox_domain	248	318

External Links

No external refs found!

AT3G54850 (PUB14, ATPUB14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation