AT3G54830

Description : Transmembrane amino acid transporter family protein

Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54830

Target	Alias	Description	ECC score	Gene Family Method
Aop_g02577	No alias	solute transporter *(AAAP) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0045.g029906	No alias	solute transporter *(AAAP) & original description: CDS=1-1626	0.04	OrthoFinder output from all 47 species
Dcu_g31336	No alias	solute transporter *(AAAP) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g38660.1	LOC_Os04g38660	solute transporter (AAAP)	0.04	OrthoFinder output from all 47 species
LOC_Os11g19240.1	LOC_Os11g19240	solute transporter (AAAP)	0.06	OrthoFinder output from all 47 species
MA_10426730g0010	No alias	solute transporter (AAAP)	0.02	OrthoFinder output from all 47 species
MA_60453g0010	No alias	solute transporter (AAAP)	0.03	OrthoFinder output from all 47 species
MA_62438g0010	No alias	Amino acid transporter AVT1C OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Msp_g31457	No alias	solute transporter *(AAAP) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g12933	No alias	solute transporter *(AAAP) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g013440.4.1	Solyc03g013440	solute transporter (AAAP)	0.03	OrthoFinder output from all 47 species
Solyc09g098380.3.1	Solyc09g098380	solute transporter (AAAP)	0.03	OrthoFinder output from all 47 species
Tin_g20653	No alias	solute transporter *(AAAP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e008656_P002	Zm00001e008656	solute transporter (AAAP)	0.04	OrthoFinder output from all 47 species
Zm00001e030719_P001	Zm00001e030719	solute transporter (AAAP)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005275	amine transmembrane transporter activity	ISS	Interproscan
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015171	amino acid transmembrane transporter activity	ISS	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013057	AA_transpt_TM	150	494

External Links

No external refs found!

AT3G54830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation