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AT3G53860


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 70 Blast hits to 70 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG0005044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53860
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Nbi_g10146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031323_P001 Zm00001e031323 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0005539 glycosaminoglycan binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019985 translesion synthesis IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
BP GO:0042276 error-prone translesion synthesis IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0042834 peptidoglycan binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043530 adenosine 5'-monophosphoramidase activity IEP HCCA
MF GO:0047627 adenylylsulfatase activity IEP HCCA
MF GO:0047710 bis(5'-adenosyl)-triphosphatase activity IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025927 Potential_DNA-bd 159 218
No external refs found!