AT3G53780 (RBL4, ATRBL4)

Aliases : RBL4, ATRBL4

Description : RHOMBOID-like protein 4

Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53780

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene43245.t1	RBL1, ATRBL1,...	protease *(RBL) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g27605	RBL1, ATRBL1	protease *(RBL) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G018300.1	RBL1, ATRBL1,...	protease *(RBL) & original description: pacid=50636147...	0.02	OrthoFinder output from all 47 species
Ceric.13G071700.1	RBL1, ATRBL1,...	protease *(RBL) & original description: pacid=50635382...	0.02	OrthoFinder output from all 47 species
LOC_Os11g47840.1	RBL1, ATRBL1,...	protease (RBL)	0.04	OrthoFinder output from all 47 species
Lfl_g06970	RBL1, ATRBL1	protease *(RBL) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g24929	RBL3, ATRBL3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018958	RBL1, ATRBL1	protease *(RBL) & original description: CDS=1-1146	0.03	OrthoFinder output from all 47 species
Spa_g57345	RBL1, ATRBL1	protease *(RBL) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022764	Peptidase_S54_rhomboid_dom	11	151

External Links

No external refs found!