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AT3G53400


Description : BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).


Gene families : OG0001013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53400

Target Alias Description ECC score Gene Family Method Actions
Aop_g13823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_8400V3.1 Pp3c3_8400 methyltransferases 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 159 200
No external refs found!