AT3G52740

Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0003074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003074_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G52740

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0102.g044576	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.08	OrthoFinder output from all 47 species
Dac_g19476	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.03	OrthoFinder output from all 47 species
Dac_g31761	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.06	OrthoFinder output from all 47 species
LOC_Os02g32990.1	LOC_Os02g32990	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Len_g02734	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.03	OrthoFinder output from all 47 species
Ore_g10176	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.02	OrthoFinder output from all 47 species
Ore_g10177	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.03	OrthoFinder output from all 47 species
Ppi_g16249	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.02	OrthoFinder output from all 47 species
Tin_g02391	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.03	OrthoFinder output from all 47 species
Tin_g20705	No alias	regulatory protein *(BIC) of cryptochrome signalling &...	0.03	OrthoFinder output from all 47 species
Zm00001e040831_P001	Zm00001e040831	Protein BIC1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010224	response to UV-B	RCA	Interproscan
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
MF	GO:0008106	alcohol dehydrogenase (NADP+) activity	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009820	alkaloid metabolic process	IEP	HCCA
BP	GO:0009821	alkaloid biosynthetic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0043393	regulation of protein binding	IEP	HCCA
BP	GO:0043496	regulation of protein homodimerization activity	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0047213	anthocyanidin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0047501	(+)-neomenthol dehydrogenase activity	IEP	HCCA
MF	GO:0047504	(-)-menthol dehydrogenase activity	IEP	HCCA
BP	GO:0051098	regulation of binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G52740

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation