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AT3G52490


Description : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52490
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.03 OrthoFinder output from all 47 species
Adi_g017569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21284 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01034648001 No alias Phytohormones.strigolactone.perception and signal... 0.1 OrthoFinder output from all 47 species
Gb_33499 No alias SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
LOC_Os02g33460.1 LOC_Os02g33460 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
LOC_Os04g33980.1 LOC_Os04g33980 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
MA_15290g0010 No alias Protein SUPPRESSOR OF MAX2 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_800170g0010 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Nbi_g06813 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08821 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020044 No alias strigolactone signal modulator *(SMXL) & original... 0.05 OrthoFinder output from all 47 species
Solyc01g007260.3.1 Solyc01g007260 SMXL strigolactone signal transducer 0.08 OrthoFinder output from all 47 species
Solyc05g055200.4.1 Solyc05g055200 SMXL strigolactone signal transducer 0.06 OrthoFinder output from all 47 species
Solyc11g006650.3.1 Solyc11g006650 SMXL strigolactone signal transducer 0.13 OrthoFinder output from all 47 species
Zm00001e008174_P001 Zm00001e008174 SMXL strigolactone signal transducer 0.09 OrthoFinder output from all 47 species
Zm00001e014748_P001 Zm00001e014748 SMXL strigolactone signal transducer 0.07 OrthoFinder output from all 47 species
Zm00001e020895_P001 Zm00001e020895 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e022317_P001 Zm00001e022317 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e024175_P002 Zm00001e024175 SMXL strigolactone signal transducer 0.08 OrthoFinder output from all 47 species
Zm00001e040845_P001 Zm00001e040845 SMXL strigolactone signal transducer 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010321 regulation of vegetative phase change IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 26 53
IPR004176 Clp_R_dom 131 168
No external refs found!