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  5. AT3G52480

AT3G52480


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0002311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52480
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene23158.t1 Aspi01Gene23158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35625.t1 Aspi01Gene35625 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52545.t1 Aspi01Gene52545 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013307 No alias not classified & original description: CDS=1-1191 0.04 OrthoFinder output from all 47 species
Ceric.11G009900.1 Ceric.11G009900 not classified & original description: pacid=50595533... 0.05 OrthoFinder output from all 47 species
Dde_g48423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_26964 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_312410g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_76111g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g09281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000482 No alias not classified & original description: CDS=1-2091 0.03 OrthoFinder output from all 47 species
Tin_g32326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031192_P001 Zm00001e031192 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0009750 response to fructose RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004792 thiosulfate sulfurtransferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007043 cell-cell junction assembly IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030104 water homeostasis IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0034329 cell junction assembly IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
CC GO:0043674 columella IEP HCCA
BP GO:0045216 cell-cell junction organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048226 Casparian strip IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0080170 hydrogen peroxide transmembrane transport IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!