AT3G51850 (CPK13)

Aliases : CPK13

Description : calcium-dependent protein kinase 13

Gene families : OG0000042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G51850

Target	Alias	Description	ECC score	Gene Family Method
AT1G35670	ATCDPK2, CPK11,...	calcium-dependent protein kinase 2	0.04	OrthoFinder output from all 47 species
Adi_g003843	CPK13	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Adi_g022772	CPK17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ala_g02136	CPK17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g11732	CPK13	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene11953.t2	CPK17, Aspi01Gene11953	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aspi01Gene12954.t1	ATCPK32, CDPK32,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aspi01Gene22502.t1	CPK5, ATCPK5,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.05G053500.1	ATCPK32, CDPK32,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.23G026700.1	CPK13, Ceric.23G026700	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.30G063400.1	CPK17, Ceric.30G063400	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.34G029000.1	CPK7, Ceric.34G029000	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g02236	CPK34	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dac_g02805	ATCDPK1, CPK10,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dac_g42746	CPK30, CDPK1A, ATCPK30	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
GSVIVT01000238001	ATCPK12, CDPK9,...	Protein modification.phosphorylation.CAMK kinase...	0.04	OrthoFinder output from all 47 species
GSVIVT01022524001	CPK20	Protein modification.phosphorylation.CAMK kinase...	0.05	OrthoFinder output from all 47 species
Gb_29448	CPK17	protein kinase (CDPK)	0.02	OrthoFinder output from all 47 species
LOC_Os01g61590.1	CPK13, LOC_Os01g61590	protein kinase (CDPK)	0.02	OrthoFinder output from all 47 species
Lfl_g05636	CPK8, CDPK19	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Lfl_g10228	CPK13	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
MA_10428197g0010	CPK13	Calcium-dependent protein kinase 16 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_8898899g0010	CPK5, ATCPK5	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species
Msp_g17463	CPK13	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g04309	CPK13	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g06740	CPK17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Pir_g09654	CPK34	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pir_g11343	CPK13	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024905	CPK5, ATCPK5	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g37870	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc04g049160.3.1	ATCPK12, CDPK9,...	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species
Solyc09g005550.3.1	CPK13, Solyc09g005550	protein kinase (CDPK)	0.02	OrthoFinder output from all 47 species
Zm00001e024506_P001	ATCPK12, CDPK9,...	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species
Zm00001e042293_P001	CPK13, Zm00001e042293	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	IDA	Interproscan
MF	GO:0004683	calmodulin-dependent protein kinase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006468	protein phosphorylation	ISS	Interproscan
BP	GO:0006468	protein phosphorylation	RCA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	IDA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016441	post-transcriptional gene silencing	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	IEP	HCCA
BP	GO:0035196	miRNA processing	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	56	312
IPR002048	EF_hand_dom	430	493
IPR002048	EF_hand_dom	358	418

External Links

No external refs found!

AT3G51850 (CPK13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation