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Description : PIF1 helicase
Gene families : OG0000992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000992_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G51690 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G30739 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT5G28780 | No alias | PIF1 helicase | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_6950V3.1 | Pp3c17_6950 | No annotation | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001872 | (1->3)-beta-D-glucan binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
| MF | GO:0008565 | obsolete protein transporter activity | IEP | HCCA |
| BP | GO:0009566 | fertilization | IEP | HCCA |
| BP | GO:0009567 | double fertilization forming a zygote and endosperm | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0032880 | regulation of protein localization | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0048240 | sperm capacitation | IEP | HCCA |
| BP | GO:0048444 | floral organ morphogenesis | IEP | HCCA |
| BP | GO:0048445 | carpel morphogenesis | IEP | HCCA |
| BP | GO:0060341 | regulation of cellular localization | IEP | HCCA |
| BP | GO:0080154 | regulation of fertilization | IEP | HCCA |
| BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:2000008 | regulation of protein localization to cell surface | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010285 | DNA_helicase_pif1-like | 57 | 213 |
| No external refs found! |