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  5. AT3G51230

AT3G51230


Description : BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0005152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G51230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00053870 evm_27.TU.AmTr_v1... No description available 0.23 OrthoFinder output from all 47 species
Adi_g016515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g37632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38808 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g12208 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g51690 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g08206 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Aop_g63946 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene00922.t1 Aspi01Gene00922 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61927.t1 Aspi01Gene61927 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0247.g060098 No alias not classified & original description: CDS=147-1268 0.03 OrthoFinder output from all 47 species
Ceric.11G031400.1 Ceric.11G031400 not classified & original description: pacid=50595031... 0.1 OrthoFinder output from all 47 species
Ceric.1Z073500.1 Ceric.1Z073500 not classified & original description: pacid=50586247... 0.14 OrthoFinder output from all 47 species
Dcu_g03833 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01018782001 No alias No description available 0.26 OrthoFinder output from all 47 species
Gb_14634 No alias no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os10g42660.1 LOC_Os10g42660 no hits & (original description: none) 0.22 OrthoFinder output from all 47 species
Len_g13480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15733 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25652 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_27772g0010 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
MA_954115g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g15450.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g07779 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Msp_g38054 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Ore_g30180 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g32303 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g41832 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022209 No alias not classified & original description: CDS=13-852 0.05 OrthoFinder output from all 47 species
Sam_g14110 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Solyc02g062170.3.1 Solyc02g062170 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Solyc02g083890.4.1 Solyc02g083890 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Spa_g40625 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g41301 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g09742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002472_P001 Zm00001e002472 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Zm00001e012997_P002 Zm00001e012997 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!