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  5. AT3G50640

AT3G50640


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50640
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT4G34419 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.09 OrthoFinder output from all 47 species
AT5G66800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.01 OrthoFinder output from all 47 species
Adi_g116381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54470.t1 Aspi01Gene54470 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G006200.1 Ceric.13G006200 not classified & original description: pacid=50636536... 0.03 OrthoFinder output from all 47 species
Dac_g09049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g06960.1 LOC_Os02g06960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g52490.2 LOC_Os02g52490 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52800.1 LOC_Os04g52800 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g41660.1 LOC_Os12g41660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065020.2.1 Solyc02g065020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054280.1.1 Solyc06g054280 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Tin_g10999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003802_P001 Zm00001e003802 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e015934_P003 Zm00001e015934 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e023821_P002 Zm00001e023821 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e030336_P001 Zm00001e030336 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004737 pyruvate decarboxylase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010396 rhamnogalacturonan II metabolic process IEP HCCA
MF GO:0015105 arsenite transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!