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AT3G49400


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0004202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49400


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0000400 four-way junction DNA binding IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031396 regulation of protein ubiquitination IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0032135 DNA insertion or deletion binding IEP HCCA
MF GO:0032137 guanine/thymine mispair binding IEP HCCA
MF GO:0032138 single base insertion or deletion binding IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032301 MutSalpha complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043570 maintenance of DNA repeat elements IEP HCCA
BP GO:0045910 negative regulation of DNA recombination IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR024761 TFIIIC_delta_N 14 179
IPR001680 WD40_repeat 432 463
IPR001680 WD40_repeat 318 357
No external refs found!