Aliases : RDM12, IDN2
Description : XH/XS domain-containing protein
Gene families : OG0002563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002563_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00230440 | RDM12, IDN2,... | Chromatin organisation.DNA methylation.canonical... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01010889001 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01016528001 | RDM12, IDN2 | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g44230.1 | RDM12, IDN2,... | IDN/IDP regulatory protein of DNA methylation pathway | 0.04 | OrthoFinder output from all 47 species | |
MA_16249g0010 | No alias | Factor of DNA methylation 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
MA_9285293g0010 | RDM12, IDN2 | IDN/IDP regulatory protein of DNA methylation pathway | 0.03 | OrthoFinder output from all 47 species | |
Mp6g07340.1 | No alias | IDN/IDP regulatory protein of DNA methylation pathway | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0036.g011557 | RDM12, IDN2 | regulatory protein of DNA methylation pathway *(IDN/IDP)... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g117040.3.1 | Solyc03g117040 | IDN/IDP regulatory protein of DNA methylation pathway | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g054420.4.1 | RDM12, IDN2,... | IDN/IDP regulatory protein of DNA methylation pathway | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g051810.4.1 | RDM12, IDN2,... | IDN/IDP regulatory protein of DNA methylation pathway | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g076210.3.1 | Solyc06g076210 | IDN/IDP regulatory protein of DNA methylation pathway | 0.06 | OrthoFinder output from all 47 species | |
Spa_g01972 | RDM12, IDN2 | regulatory protein of DNA methylation pathway *(IDN/IDP)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016919_P001 | Zm00001e016919 | IDN/IDP regulatory protein of DNA methylation pathway | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020386_P003 | RDM12, IDN2,... | IDN/IDP regulatory protein of DNA methylation pathway | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e025803_P001 | Zm00001e025803 | IDN/IDP regulatory protein of DNA methylation pathway | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0006306 | DNA methylation | IMP | Interproscan |
BP | GO:0006306 | DNA methylation | IGI | Interproscan |
BP | GO:0046686 | response to cadmium ion | IEP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
BP | GO:0000725 | recombinational repair | IEP | HCCA |
BP | GO:0002376 | immune system process | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | HCCA |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006471 | obsolete protein ADP-ribosylation | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
BP | GO:0006955 | immune response | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
BP | GO:0007049 | cell cycle | IEP | HCCA |
BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
BP | GO:0007154 | cell communication | IEP | HCCA |
BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
BP | GO:0007389 | pattern specification process | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
BP | GO:0008300 | isoprenoid catabolic process | IEP | HCCA |
BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
BP | GO:0009556 | microsporogenesis | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
BP | GO:0009615 | response to virus | IEP | HCCA |
BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
BP | GO:0009685 | gibberellin metabolic process | IEP | HCCA |
BP | GO:0009791 | post-embryonic development | IEP | HCCA |
BP | GO:0009799 | specification of symmetry | IEP | HCCA |
BP | GO:0009838 | abscission | IEP | HCCA |
BP | GO:0009855 | determination of bilateral symmetry | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009900 | dehiscence | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
BP | GO:0009910 | negative regulation of flower development | IEP | HCCA |
BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IEP | HCCA |
BP | GO:0010014 | meristem initiation | IEP | HCCA |
BP | GO:0010047 | fruit dehiscence | IEP | HCCA |
BP | GO:0010050 | vegetative phase change | IEP | HCCA |
BP | GO:0010073 | meristem maintenance | IEP | HCCA |
BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
BP | GO:0010262 | somatic embryogenesis | IEP | HCCA |
BP | GO:0010264 | myo-inositol hexakisphosphate biosynthetic process | IEP | HCCA |
BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016101 | diterpenoid metabolic process | IEP | HCCA |
BP | GO:0016103 | diterpenoid catabolic process | IEP | HCCA |
BP | GO:0016115 | terpenoid catabolic process | IEP | HCCA |
BP | GO:0016441 | post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0016444 | somatic cell DNA recombination | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0023052 | signaling | IEP | HCCA |
BP | GO:0030422 | siRNA processing | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0031048 | RNA-mediated heterochromatin formation | IEP | HCCA |
BP | GO:0031099 | regeneration | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0031507 | heterochromatin formation | IEP | HCCA |
BP | GO:0031936 | obsolete negative regulation of chromatin silencing | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032870 | cellular response to hormone stimulus | IEP | HCCA |
BP | GO:0032958 | inositol phosphate biosynthetic process | IEP | HCCA |
BP | GO:0033037 | polysaccharide localization | IEP | HCCA |
BP | GO:0033517 | myo-inositol hexakisphosphate metabolic process | IEP | HCCA |
BP | GO:0034293 | sexual sporulation | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0035196 | miRNA processing | IEP | HCCA |
BP | GO:0035510 | DNA dealkylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0040029 | epigenetic regulation of gene expression | IEP | HCCA |
MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
MF | GO:0043621 | protein self-association | IEP | HCCA |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
BP | GO:0043687 | post-translational protein modification | IEP | HCCA |
BP | GO:0043934 | sporulation | IEP | HCCA |
BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
BP | GO:0045087 | innate immune response | IEP | HCCA |
BP | GO:0045487 | gibberellin catabolic process | IEP | HCCA |
BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
BP | GO:0048236 | plant-type sporogenesis | IEP | HCCA |
BP | GO:0048449 | floral organ formation | IEP | HCCA |
BP | GO:0048451 | petal formation | IEP | HCCA |
BP | GO:0048453 | sepal formation | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048577 | negative regulation of short-day photoperiodism, flowering | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048581 | negative regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048587 | regulation of short-day photoperiodism, flowering | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051241 | negative regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051321 | meiotic cell cycle | IEP | HCCA |
BP | GO:0051567 | histone H3-K9 methylation | IEP | HCCA |
BP | GO:0051607 | defense response to virus | IEP | HCCA |
BP | GO:0051707 | response to other organism | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0052386 | cell wall thickening | IEP | HCCA |
BP | GO:0052543 | callose deposition in cell wall | IEP | HCCA |
BP | GO:0052545 | callose localization | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0060860 | regulation of floral organ abscission | IEP | HCCA |
BP | GO:0060862 | negative regulation of floral organ abscission | IEP | HCCA |
BP | GO:0060867 | fruit abscission | IEP | HCCA |
BP | GO:0061647 | histone H3-K9 modification | IEP | HCCA |
BP | GO:0065001 | specification of axis polarity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
BP | GO:0070828 | heterochromatin organization | IEP | HCCA |
BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
BP | GO:0070988 | demethylation | IEP | HCCA |
BP | GO:0071310 | cellular response to organic substance | IEP | HCCA |
BP | GO:0071365 | cellular response to auxin stimulus | IEP | HCCA |
BP | GO:0071495 | cellular response to endogenous stimulus | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0080050 | regulation of seed development | IEP | HCCA |
BP | GO:0080111 | DNA demethylation | IEP | HCCA |
BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0098542 | defense response to other organism | IEP | HCCA |
BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:0140718 | facultative heterochromatin formation | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1905393 | plant organ formation | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | HCCA |
BP | GO:2000034 | regulation of seed maturation | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
BP | GO:2000242 | negative regulation of reproductive process | IEP | HCCA |
BP | GO:2000692 | negative regulation of seed maturation | IEP | HCCA |
No external refs found! |