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AT3G48450


Description : RPM1-interacting protein 4 (RIN4) family protein


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48450
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Als_g35611 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aob_g28616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0111.g045667 RIN4 not classified & original description: CDS=218-763 0.03 OrthoFinder output from all 47 species
Cba_g05087 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Ceric.28G064600.1 Ceric.28G064600 not classified & original description: pacid=50570618... 0.03 OrthoFinder output from all 47 species
Ceric.28G064700.1 Ceric.28G064700 not classified & original description: pacid=50570623... 0.03 OrthoFinder output from all 47 species
Ehy_g09036 NOI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16670 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
GSVIVT01003976001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01030113001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g49340.1 LOC_Os02g49340 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g52950.1 LOC_Os04g52950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12478 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Spa_g14777 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011655_P004 RIN4, Zm00001e011655 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010167 response to nitrate ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 5 40
No external refs found!