AT3G48180


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0002636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002636_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48180

Target Alias Description ECC score Gene Family Method Actions
Ceric.28G027600.1 Ceric.28G027600 not classified & original description: pacid=50570608... 0.04 OrthoFinder output from all 47 species
Gb_12961 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434785g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_631234g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_86162g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g49675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010680 No alias not classified & original description: CDS=1-261 0.03 OrthoFinder output from all 47 species
Solyc05g006390.1.1 Solyc05g006390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0001561 fatty acid alpha-oxidation IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
BP GO:0042759 long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071407 cellular response to organic cyclic compound IEP HCCA
BP GO:0071446 cellular response to salicylic acid stimulus IEP HCCA
BP GO:0071731 response to nitric oxide IEP HCCA
BP GO:0071732 cellular response to nitric oxide IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
BP GO:1902609 (R)-2-hydroxy-alpha-linolenic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!