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Description : unknown protein; Has 22990 Blast hits to 12942 proteins in 666 species: Archae - 8; Bacteria - 739; Metazoa - 13803; Fungi - 2465; Plants - 1363; Viruses - 116; Other Eukaryotes - 4496 (source: NCBI BLink).
Gene families : OG0007390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007390_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G48120 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g03973 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g34587 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_550158g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | HCCA |
| MF | GO:0001093 | TFIIB-class transcription factor binding | IEP | HCCA |
| MF | GO:0001098 | basal transcription machinery binding | IEP | HCCA |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| BP | GO:0009790 | embryo development | IEP | HCCA |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
| BP | GO:0009846 | pollen germination | IEP | HCCA |
| BP | GO:0010440 | stomatal lineage progression | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0048825 | cotyledon development | IEP | HCCA |
| MF | GO:0070063 | RNA polymerase binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |