1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G47790

AT3G47790 (ATH7, ATATH7)


Aliases : ATH7, ATATH7

Description : ABC2 homolog 7


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47790
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00139590 ATH16, ATATH16,... ABC transporter A family member 12 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G47740 ATATH2, ATH2, ABCA3 ABC2 homolog 2 0.05 OrthoFinder output from all 47 species
AT3G47760 ATATH4, ABCA5, ATH4 ABC2 homolog 4 0.03 OrthoFinder output from all 47 species
Dac_g07523 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008040001 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01025902001 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01029736001 ATH7, ATATH7 ABC transporter A family member 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g11960.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
LOC_Os08g30770.1 ATATH6, ATH6,... subfamily ABCA transporter 0.05 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Msp_g11278 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g10749 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010130 ATH7, ATATH7 subfamily ABCA transporter & original description: CDS=142-3033 0.03 OrthoFinder output from all 47 species
Sam_g16539 No alias subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
Solyc03g113040.4.1 ATATH6, ATH6,... subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species
Solyc06g070950.2.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Zm00001e014485_P003 ATH7, ATATH7,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Zm00001e014489_P004 ATATH14, ATH14,... subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004046 aminoacylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009712 catechol-containing compound metabolic process IEP HCCA
BP GO:0009713 catechol-containing compound biosynthetic process IEP HCCA
BP GO:0009801 cinnamic acid ester metabolic process IEP HCCA
BP GO:0009802 cinnamic acid ester biosynthetic process IEP HCCA
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031226 obsolete intrinsic component of plasma membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
MF GO:0050302 indole-3-acetaldehyde oxidase activity IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
MF GO:0090430 caffeoyl-CoA: alcohol caffeoyl transferase activity IEP HCCA
BP GO:0090431 alkyl caffeate ester biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 608 752
No external refs found!