Aliases : ATATH6, ATH6
Description : ABC2 homolog 6
Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G47780 | |
Cluster | HCCA: Cluster_113 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00139590 | ATH16, ATATH16,... | ABC transporter A family member 12 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
AT3G47740 | ATATH2, ATH2, ABCA3 | ABC2 homolog 2 | 0.03 | OrthoFinder output from all 47 species | |
AT3G47750 | ABCA4, ATATH3 | ATP binding cassette subfamily A4 | 0.04 | OrthoFinder output from all 47 species | |
Aev_g01577 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g38161 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g04431 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000057.67 | ATATH4, ABCA5, ATH4 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g618400 | ATH7, ATATH7 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008040001 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01029736001 | ATH7, ATATH7 | ABC transporter A family member 8 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os08g30770.1 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.06 | OrthoFinder output from all 47 species | |
Mp5g00540.1 | ATH7, ATATH7 | subfamily ABCA transporter | 0.02 | OrthoFinder output from all 47 species | |
Mp7g18420.1 | ATH7, ATATH7 | subfamily ABCA transporter | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g08039 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g28561 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo171117 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Smo268954 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014485_P003 | ATH7, ATATH7,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014489_P004 | ATATH14, ATH14,... | subfamily ABCA transporter | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e022343_P002 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | ISS | Interproscan |
CC | GO:0005886 | plasma membrane | IDA | Interproscan |
BP | GO:0009407 | toxin catabolic process | RCA | Interproscan |
CC | GO:0009506 | plasmodesma | IDA | Interproscan |
BP | GO:0010583 | response to cyclopentenone | RCA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
BP | GO:0000302 | response to reactive oxygen species | IEP | HCCA |
BP | GO:0000303 | response to superoxide | IEP | HCCA |
BP | GO:0000305 | response to oxygen radical | IEP | HCCA |
BP | GO:0001666 | response to hypoxia | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006865 | amino acid transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006972 | hyperosmotic response | IEP | HCCA |
MF | GO:0008559 | ABC-type xenobiotic transporter activity | IEP | HCCA |
BP | GO:0009411 | response to UV | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009606 | tropism | IEP | HCCA |
BP | GO:0009627 | systemic acquired resistance | IEP | HCCA |
BP | GO:0009629 | response to gravity | IEP | HCCA |
BP | GO:0009630 | gravitropism | IEP | HCCA |
BP | GO:0009696 | salicylic acid metabolic process | IEP | HCCA |
BP | GO:0009697 | salicylic acid biosynthetic process | IEP | HCCA |
BP | GO:0009723 | response to ethylene | IEP | HCCA |
BP | GO:0009735 | response to cytokinin | IEP | HCCA |
BP | GO:0009738 | abscisic acid-activated signaling pathway | IEP | HCCA |
BP | GO:0009753 | response to jasmonic acid | IEP | HCCA |
BP | GO:0009873 | ethylene-activated signaling pathway | IEP | HCCA |
BP | GO:0009914 | hormone transport | IEP | HCCA |
BP | GO:0009926 | auxin polar transport | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010224 | response to UV-B | IEP | HCCA |
BP | GO:0010315 | auxin export across the plasma membrane | IEP | HCCA |
MF | GO:0010328 | auxin influx transmembrane transporter activity | IEP | HCCA |
MF | GO:0010329 | auxin efflux transmembrane transporter activity | IEP | HCCA |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
BP | GO:0010540 | basipetal auxin transport | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
BP | GO:0018958 | phenol-containing compound metabolic process | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
BP | GO:0030163 | protein catabolic process | IEP | HCCA |
BP | GO:0035966 | response to topologically incorrect protein | IEP | HCCA |
BP | GO:0036293 | response to decreased oxygen levels | IEP | HCCA |
BP | GO:0036294 | cellular response to decreased oxygen levels | IEP | HCCA |
BP | GO:0042537 | benzene-containing compound metabolic process | IEP | HCCA |
BP | GO:0042538 | hyperosmotic salinity response | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
BP | GO:0042991 | obsolete transcription factor import into nucleus | IEP | HCCA |
BP | GO:0043090 | amino acid import | IEP | HCCA |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0043248 | proteasome assembly | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0046189 | phenol-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048767 | root hair elongation | IEP | HCCA |
BP | GO:0051788 | response to misfolded protein | IEP | HCCA |
BP | GO:0060918 | auxin transport | IEP | HCCA |
BP | GO:0060919 | auxin import into cell | IEP | HCCA |
BP | GO:0070482 | response to oxygen levels | IEP | HCCA |
BP | GO:0070542 | response to fatty acid | IEP | HCCA |
BP | GO:0070887 | cellular response to chemical stimulus | IEP | HCCA |
BP | GO:0071453 | cellular response to oxygen levels | IEP | HCCA |
BP | GO:0071456 | cellular response to hypoxia | IEP | HCCA |
MF | GO:0080161 | auxin transmembrane transporter activity | IEP | HCCA |
BP | GO:0098657 | import into cell | IEP | HCCA |
BP | GO:0098739 | import across plasma membrane | IEP | HCCA |
BP | GO:0140115 | export across plasma membrane | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003439 | ABC_transporter-like_ATP-bd | 635 | 779 |
No external refs found! |