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  5. AT3G47610

AT3G47610


Description : transcription regulators;zinc ion binding


Gene families : OG0005090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47610
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Aop_g08012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011778_P001 Zm00001e011778 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008284 positive regulation of cell population proliferation RCA Interproscan
BP GO:0048573 photoperiodism, flowering RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004105 choline-phosphate cytidylyltransferase activity IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006656 phosphatidylcholine biosynthetic process IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
CC GO:0031307 obsolete integral component of mitochondrial outer membrane IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046470 phosphatidylcholine metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009349 Znf_C2HC5 158 198
No external refs found!