AT3G47520 (MDH)

Aliases : MDH

Description : malate dehydrogenase

Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G47520

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020369	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Als_g21859	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Ceric.16G039200.1	mMDH1, Ceric.16G039200	peroxisomal NAD-dependent malate dehydrogenase &...	0.05	OrthoFinder output from all 47 species
Dcu_g03735	mMDH1	mitochondrial NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Gb_31581	mMDH1	mitochondrial NAD-dependent malate dehydrogenase	0.05	OrthoFinder output from all 47 species
LOC_Os01g46070.1	mMDH1, LOC_Os01g46070	mitochondrial NAD-dependent malate dehydrogenase	0.02	OrthoFinder output from all 47 species
Len_g10602	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.03	OrthoFinder output from all 47 species
MA_15580g0010	mMDH1	mitochondrial NAD-dependent malate dehydrogenase	0.04	OrthoFinder output from all 47 species
Mp5g19470.1	mMDH2	mitochondrial NAD-dependent malate dehydrogenase	0.04	OrthoFinder output from all 47 species
Mp7g08650.1	MDH	malate dehydrogenase component of AAA-ATPase motor complex	0.05	OrthoFinder output from all 47 species
Msp_g01968	mMDH2	mitochondrial NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Nbi_g02886	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.03	OrthoFinder output from all 47 species
Sam_g15366	No alias	mitochondrial NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Solyc03g115990.3.1	MDH, Solyc03g115990	malate dehydrogenase component of AAA-ATPase motor complex	0.05	OrthoFinder output from all 47 species
Solyc07g062650.4.1	mMDH1, Solyc07g062650	mitochondrial NAD-dependent malate dehydrogenase	0.06	OrthoFinder output from all 47 species
Spa_g09592	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0010319	stromule	IDA	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016615	malate dehydrogenase activity	ISS	Interproscan
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0030060	L-malate dehydrogenase activity	IDA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0005982	starch metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022383	Lactate/malate_DH_C	228	393
IPR001236	Lactate/malate_DH_N	83	226

External Links

No external refs found!

AT3G47520 (MDH)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation