Gb_39267


Description : valine-tRNA ligase


Gene families : OG_01_0001405 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001405_tree ,
OG_02_0005398 (LandPlants) Phylogenetic Tree(s): OG_02_0005398_tree ,
OG_03_0004970 (SeedPlants) Phylogenetic Tree(s): OG_03_0004970_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39267
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00143390 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 Archaeplastida
AMTR_s00038p00088230 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
AT5G16715 EMB2247 ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.08 Archaeplastida
Cpa|evm.model.tig00000402.37 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cpa|evm.model.tig00001130.5 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
Cre07.g350500 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
LOC_Os07g06940.1 No alias valine-tRNA ligase 0.03 Archaeplastida
MA_374514g0010 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.05 Archaeplastida
Mp2g20730.1 No alias valine-tRNA ligase 0.1 Archaeplastida
Pp3c12_13790V3.1 No alias ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.08 Archaeplastida
Solyc12g019100.2.1 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.07 Archaeplastida
Solyc12g019110.3.1 No alias valine-tRNA ligase 0.06 Archaeplastida
Zm00001e011483_P001 No alias valine-tRNA ligase 0.11 Archaeplastida
AMTR_s00004p00143390 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 LandPlants
AT5G16715 EMB2247 ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.06 LandPlants
LOC_Os07g06940.1 No alias valine-tRNA ligase 0.03 LandPlants
MA_374514g0010 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.03 LandPlants
Mp2g20730.1 No alias valine-tRNA ligase 0.1 LandPlants
Pp3c12_13790V3.1 No alias ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.07 LandPlants
Solyc12g019100.2.1 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.05 LandPlants
Solyc12g019110.3.1 No alias valine-tRNA ligase 0.04 LandPlants
Zm00001e011483_P001 No alias valine-tRNA ligase 0.1 LandPlants
AMTR_s00004p00143390 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 SeedPlants
AT5G16715 EMB2247 ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.06 SeedPlants
GSVIVT01030775001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 SeedPlants
LOC_Os07g06940.1 No alias valine-tRNA ligase 0.03 SeedPlants
MA_374514g0010 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.03 SeedPlants
Solyc12g019100.2.1 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.05 SeedPlants
Solyc12g019110.3.1 No alias valine-tRNA ligase 0.04 SeedPlants
Zm00001e011483_P001 No alias valine-tRNA ligase 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004832 valine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
BP GO:0006438 valyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019499 Val-tRNA_synth_tRNA-bd 667 731
IPR002300 aa-tRNA-synth_Ia 1 403
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 458 603
No external refs found!