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Description : BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0001007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g017033 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g22710 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g50895 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0192.g057033 | No alias | not classified & original description: CDS=367-1197 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71421 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g44547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10442 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38166 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g01960.1 | LOC_Os04g01960 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g53923 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30647 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g35621 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g052990.4.1 | MEE60, Solyc05g052990 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005575 | cellular_component | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005345 | purine nucleobase transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009690 | cytokinin metabolic process | IEP | HCCA |
| BP | GO:0009691 | cytokinin biosynthetic process | IEP | HCCA |
| MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010030 | positive regulation of seed germination | IEP | HCCA |
| BP | GO:0010074 | maintenance of meristem identity | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010817 | regulation of hormone levels | IEP | HCCA |
| MF | GO:0015205 | nucleobase transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | HCCA |
| BP | GO:0018345 | protein palmitoylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| MF | GO:0019825 | oxygen binding | IEP | HCCA |
| BP | GO:0019827 | stem cell population maintenance | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042445 | hormone metabolic process | IEP | HCCA |
| BP | GO:0042446 | hormone biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | HCCA |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048582 | positive regulation of post-embryonic development | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080050 | regulation of seed development | IEP | HCCA |
| MF | GO:0080072 | spermidine:sinapoyl CoA N-acyltransferase activity | IEP | HCCA |
| MF | GO:0080089 | sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0098727 | maintenance of cell number | IEP | HCCA |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2000034 | regulation of seed maturation | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |