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  5. AT3G44490

AT3G44490 (hda17)


Aliases : hda17

Description : histone deacetylase 17


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G44490
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene37896.t1 hda17, Aspi01Gene37896 histone deacetylase *(HDA8) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001307.14 HDA09, HDA9 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase... 0.02 OrthoFinder output from all 47 species
Zm00001e008229_P001 HDA09, HDA9,... class-I histone deacetylase. component HDA9 of HDA9-PWR... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015368 calcium:monoatomic cation antiporter activity IEP HCCA
MF GO:0015491 obsolete cation:cation antiporter activity IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!