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  5. AT3G44180

AT3G44180


Description : syntaxin-related family protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G44180
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT1G58310 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G29930 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.02 OrthoFinder output from all 47 species
AT3G44060 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G49150 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G58860 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58880 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G58950 No alias F-box/RNI-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G58960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G59160 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G59170 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G59230 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G59270 No alias FBD-like domain family protein 0.03 OrthoFinder output from all 47 species
AT3G59460 No alias BEST Arabidopsis thaliana protein match is: F-box family... 0.03 OrthoFinder output from all 47 species
AT3G62440 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G00320 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G13960 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G15620 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G25860 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.02 OrthoFinder output from all 47 species
AT5G38386 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G38392 No alias No description available 0.02 OrthoFinder output from all 47 species
AT5G38396 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G41830 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0006863 purine nucleobase transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!