AT3G43960

Description : Cysteine proteinases superfamily protein

Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G43960
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00178750	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00021p00178760	XCP1,...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00215530	SAG12,...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00215860	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s01332p00008900	SAG12,...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AT3G48340	No alias	Cysteine proteinases superfamily protein	0.05	OrthoFinder output from all 47 species
AT4G11320	No alias	Papain family cysteine protease	0.04	OrthoFinder output from all 47 species
Aev_g37857	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Aob_g07150	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene04262.t1	XCP1, Aspi01Gene04262	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0068.g036453	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Cba_g06207	XBCP3	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ceric.29G055400.1	Ceric.29G055400	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Ceric.39G014000.1	XCP2, Ceric.39G014000	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Dac_g35831	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Dac_g38578	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Dac_g39707	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Dac_g39708	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Dcu_g06134	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Dcu_g09809	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Dde_g23863	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ehy_g13895	CP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01020657001	No alias	Probable cysteine protease RD21B OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_17130	No alias	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.03	OrthoFinder output from all 47 species
Gb_19399	No alias	Prgrammed Cell Death cysteine protease (XCP)	0.04	OrthoFinder output from all 47 species
Gb_24406	No alias	protease (Papain)	0.03	OrthoFinder output from all 47 species
LOC_Os01g67980.1	LOC_Os01g67980	protease (Papain)	0.04	OrthoFinder output from all 47 species
LOC_Os02g48450.1	XCP2, LOC_Os02g48450	Prgrammed Cell Death cysteine protease (XCP)	0.03	OrthoFinder output from all 47 species
LOC_Os03g54130.1	SAG12, LOC_Os03g54130	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.04	OrthoFinder output from all 47 species
LOC_Os08g44270.1	LOC_Os08g44270	protease (Papain)	0.06	OrthoFinder output from all 47 species
LOC_Os09g38920.1	SAG12, LOC_Os09g38920	Senescence-specific cysteine protease SAG12...	0.04	OrthoFinder output from all 47 species
LOC_Os11g14900.4	LOC_Os11g14900	protease (Papain)	0.04	OrthoFinder output from all 47 species
MA_10429635g0010	XCP1	Cysteine protease XCP1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Mp1g03230.1	XCP1	Oryzain alpha chain OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Msp_g15927	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Nbi_g04349	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Nbi_g39290	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ore_g33943	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Pnu_g33775	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s2981.g028542	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Sam_g15651	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Solyc02g076910.3.1	SAG12, Solyc02g076910	protease (Papain)	0.03	OrthoFinder output from all 47 species
Solyc02g077040.4.1	Solyc02g077040	Senescence-specific cysteine protease SAG12...	0.03	OrthoFinder output from all 47 species
Solyc02g093040.4.1	RD21, RD21A,...	Cysteine proteinase RD21A OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc05g013920.4.1	Solyc05g013920	protease (Papain)	0.03	OrthoFinder output from all 47 species
Tin_g37188	No alias	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Tin_g38535	RD19A, RD19	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Tin_g40421	RD21, RD21A	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Zm00001e006598_P002	Zm00001e006598	Oryzain beta chain OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Zm00001e028260_P001	XCP2, Zm00001e028260	Cysteine protease XCP2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e029667_P001	XCP2, Zm00001e029667	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006508	proteolysis	ISS	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	ISS	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
BP	GO:0040007	growth	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048767	root hair elongation	IMP	Interproscan
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046577	long-chain-alcohol oxidase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000668	Peptidase_C1A_C	127	346
IPR013201	Prot_inhib_I29	41	98

External Links

No external refs found!

AT3G43960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation