AT3G43590


Description : zinc knuckle (CCHC-type) family protein


Gene families : OG0004324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G43590

Target Alias Description ECC score Gene Family Method Actions
Dcu_g22621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007032 endosome organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0080171 lytic vacuole organization IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1990019 protein storage vacuole organization IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 210 224
IPR001878 Znf_CCHC 167 182
IPR001878 Znf_CCHC 358 373
IPR001878 Znf_CCHC 326 342
No external refs found!