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AT3G43230


Description : RING/FYVE/PHD-type zinc finger family protein


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G43230
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00011660 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00170p00062530 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
Als_g07342 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60752.t1 Aspi01Gene60752 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18591 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
GSVIVT01014153001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01015009001 No alias No description available 0.03 OrthoFinder output from all 47 species
Msp_g10419 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Ore_g05728 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ore_g09436 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Pnu_g11792 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Solyc02g071980.3.1 Solyc02g071980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g017500.3.1 Solyc07g017500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17958 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Zm00001e024905_P001 Zm00001e024905 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006914 autophagy RCA Interproscan
BP GO:0007165 signal transduction ISS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
MF GO:0035091 phosphatidylinositol binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007568 aging IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
CC GO:0010008 endosome membrane IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0046967 cytosol to endoplasmic reticulum transport IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 353 478
IPR000306 Znf_FYVE 171 236
No external refs found!