AMTR_s00049p00181100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.175

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0002916 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002916_tree ,
OG_02_0001878 (LandPlants) Phylogenetic Tree(s): OG_02_0001878_tree ,
OG_03_0001362 (SeedPlants) Phylogenetic Tree(s): OG_03_0001362_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00181100
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT3G48430 REF6 relative of early flowering 6 0.02 Archaeplastida
AT5G04240 ELF6 Zinc finger (C2H2 type) family protein / transcription... 0.03 Archaeplastida
GSVIVT01007564001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
GSVIVT01016246001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida
LOC_Os12g18150.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.06 Archaeplastida
Pp3c11_24630V3.1 No alias relative of early flowering 6 0.03 Archaeplastida
Pp3c7_8710V3.1 No alias Zinc finger (C2H2 type) family protein / transcription... 0.02 Archaeplastida
Solyc03g111590.4.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 Archaeplastida
Zm00001e028534_P001 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 Archaeplastida
Zm00001e039647_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
AT5G04240 ELF6 Zinc finger (C2H2 type) family protein / transcription... 0.02 LandPlants
GSVIVT01016246001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 LandPlants
LOC_Os12g18150.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 LandPlants
Pp3c11_24630V3.1 No alias relative of early flowering 6 0.02 LandPlants
Pp3c7_8710V3.1 No alias Zinc finger (C2H2 type) family protein / transcription... 0.01 LandPlants
Solyc03g111590.4.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 LandPlants
Zm00001e039647_P002 No alias no hits & (original description: none) 0.03 LandPlants
AT3G48430 REF6 relative of early flowering 6 0.02 SeedPlants
AT5G04240 ELF6 Zinc finger (C2H2 type) family protein / transcription... 0.02 SeedPlants
GSVIVT01016246001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 SeedPlants
LOC_Os12g18150.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 SeedPlants
Solyc03g111590.4.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 SeedPlants
Zm00001e039647_P002 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003347 JmjC_dom 206 325
IPR003349 JmjN 17 50
No external refs found!