AT3G29390 (RIK)

Aliases : RIK

Description : RS2-interacting KH protein

Gene families : OG0003712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003712_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G29390

Target	Alias	Description	ECC score	Gene Family Method
Als_g23032	RIK	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32926	RIK	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene70170.t1	RIK, Aspi01Gene70170	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48860	RIK	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g09097	RIK	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	TAS	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
BP	GO:0006261	DNA-templated DNA replication	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008970	phospholipase A1 activity	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009590	detection of gravity	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009660	amyloplast organization	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0009959	negative gravitropism	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!